A random-walk Metropolis chain with a Gaussian proposal of width samples a fixed…
PHYSICS · Multi-part · Fermi University Physics · Computational Physics · Monte Carlo and lattice simulation of physical systems · Monte Carlo and lattice simulation of physical systems
Error, Chance and the Machine, Ch Markov-chain Monte Carlo
Problem
A random-walk Metropolis chain with a Gaussian proposal of width σprop samples a fixed target distribution for an observable A. A run of N=1×105 steps is repeated at four proposal widths, giving the acceptance rate and the windowed estimate of τint(A) below: σprop=0.5 has acceptance 0.82 and τint(A)=12.5; σprop=1.5 has acceptance 0.51 and τint(A)=3.0; σprop=2.5 has acceptance 0.28 and τint(A)=2.6; σprop=5.0 has acceptance 0.09 and τint(A)=6.0.
((a)) Compute Neff for A at each of the four proposal widths.
((b)) State which proposal width gives the most efficient sampling of A for this fixed run length.
((c)) Say whether the most efficient width is the one nearest 50 per cent acceptance, and explain in one sentence why acceptance rate alone does not decide the best proposal.